Archives of Pediatric Infectious Diseases

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Evaluation of Sensitivity of Molecular Methods for Detection of Rifampin-Resistant Strains Amongst Drug-resistant Mycobacterium tuberculosis Isolates

Mahdi Behdani 1 , Hoshang Rafatpanah 2 , Alireza Mohammadzadeh 3 , * , Kiarash Ghazvini 4 , Mostafa Amiri 5 and Jalal Mardaneh 3
Authors Information
1 Biotechnology Research Center, Venom & Biotherapeutics Molecules Lab., Pasteur Institute of Iran, Tehran, IR Iran
2 Immunology Department, Mashhad University of Medical Sciences, Mashhad, IR Iran
3 Microbiology Department, School of Medicine, Gonabad University of Medical Sciences, Gonabad, IR Iran
4 Mycobacteriology Department, Microbiology and Virology Research Center, Mashhad University of Medical Sciences, Mashhad, IR Iran
5 Basic Sciences Department, Faculty of Para Medicine Sciences, Gonabad University of Medical Sciences, Gonabad, IR Iran
Article information
  • Archives of Pediatric Infectious Diseases: July 2017, 5 (3); e40580
  • Published Online: October 16, 2016
  • Article Type: Research Article
  • Received: July 3, 2016
  • Revised: September 12, 2016
  • Accepted: October 1, 2016
  • DOI: 10.5812/pedinfect.40580

To Cite: Behdani M, Rafatpanah H, Mohammadzadeh A, Ghazvini K, Amiri M, et al. Evaluation of Sensitivity of Molecular Methods for Detection of Rifampin-Resistant Strains Amongst Drug-resistant Mycobacterium tuberculosis Isolates, Arch Pediatr Infect Dis. 2017 ;5(3):e40580. doi: 10.5812/pedinfect.40580.

Abstract
Copyright: Copyright © 2017, Archives of Pediatric Infectious Diseases. This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (http://creativecommons.org/licenses/by-nc/4.0/) which permits copy and redistribute the material just in noncommercial usages, provided the original work is properly cited.
1. Background
2. Objectives
3. Methods
4. Results
5. Discussion
Acknowledgements
Footnote
References
  • 1. Zumla A, Raviglione M, Hafner R, von Reyn CF. Tuberculosis. N Engl J Med. 2013; 368(8): 745-55[DOI][PubMed]
  • 2. Regional office for the eastern mediterranean: Islamic Republic of Iran profile:World Health Organization. 2015;
  • 3. Palomino JC, Martin A. Drug Resistance Mechanisms in Mycobacterium tuberculosis. Antibiotics (Basel). 2014; 3(3): 317-40[DOI][PubMed]
  • 4. Jassal M, Bishai WR. Extensively drug-resistant tuberculosis. Lancet Infect Dis. 2009; 9(1): 19-30[DOI][PubMed]
  • 5. Madariaga MG, Lalloo UG, Swindells S. Extensively drug-resistant tuberculosis. Am J Med. 2008; 121(10): 835-44[DOI][PubMed]
  • 6. Ahmed I, Jabeen K, Inayat R, Hasan R. Susceptibility testing of extensively drug-resistant and pre-extensively drug-resistant Mycobacterium tuberculosis against levofloxacin, linezolid, and amoxicillin-clavulanate. Antimicrob Agents Chemother. 2013; 57(6): 2522-5[DOI][PubMed]
  • 7. Global tuberculosis report. 2015;
  • 8. Global tuberculosis control: WHO report. 2011;
  • 9. Masjedi MR, Farnia P, Sorooch S, Pooramiri MV, Mansoori SD, Zarifi AZ, et al. Extensively drug-resistant tuberculosis: 2 years of surveillance in Iran. Clin Infect Dis. 2006; 43(7): 841-7[DOI][PubMed]
  • 10. Jacobson KR, Tierney DB, Jeon CY, Mitnick CD, Murray MB. Treatment outcomes among patients with extensively drug-resistant tuberculosis: systematic review and meta-analysis. Clin Infect Dis. 2010; 51(1): 6-14[DOI][PubMed]
  • 11. Blanchard JS. Molecular mechanisms of drug resistance in Mycobacterium tuberculosis. Annu Rev Biochem. 1996; 65: 215-39[DOI][PubMed]
  • 12. Mokrousov I, Otten T, Vyshnevskiy B, Narvskaya O. Allele-specific rpoB PCR assays for detection of rifampin-resistant Mycobacterium tuberculosis in sputum smears. Antimicrob Agents Chemother. 2003; 47(7): 2231-5[PubMed]
  • 13. Chia BS, Lanzas F, Rifat D, Herrera A, Kim EY, Sailer C, et al. Use of multiplex allele-specific polymerase chain reaction (MAS-PCR) to detect multidrug-resistant tuberculosis in Panama. PLoS One. 2012; 7(7): 40456[DOI][PubMed]
  • 14. Palomino JC, Martin A, Portaels F. Rapid drug resistance detection in Mycobacterium tuberculosis: a review of colourimetric methods. Clin Microbiol Infect. 2007; 13(8): 754-62[DOI][PubMed]
  • 15. Mohammadzadeh A, Farnia P, Ghazvini K, Behdani M, Rashed T, Ghanaat J. Rapid and low-cost colorimetric method using 2,3,5-triphenyltetrazolium chloride for detection of multidrug-resistant Mycobacterium tuberculosis. J Med Microbiol. 2006; 55: 1657-9[DOI][PubMed]
  • 16. Fan XY, Hu ZY, Xu FH, Yan ZQ, Guo SQ, Li ZM. Rapid detection of rpoB gene mutations in rifampin-resistant Mycobacterium tuberculosis isolates in shanghai by using the amplification refractory mutation system. J Clin Microbiol. 2003; 41(3): 993-7[PubMed]
  • 17. Gupta A, Prakash P, Singh SK, Anupurba S. Rapid genotypic detection of rpoB and katG gene mutations in Mycobacterium tuberculosis clinical isolates from Northern India as determined by MAS-PCR. J Clin Lab Anal. 2013; 27(1): 31-7[DOI][PubMed]
  • 18. Kim BJ, Kim SY, Park BH, Lyu MA, Park IK, Bai GH, et al. Mutations in the rpoB gene of Mycobacterium tuberculosis that interfere with PCR-single-strand conformation polymorphism analysis for rifampin susceptibility testing. J Clin Microbiol. 1997; 35(2): 492-4[PubMed]
  • 19. Grutzmacher LK, Dalmarco EM, Blatt SL, Cordova CM. Drug resistance of Mycobacterium tuberculosis strains in southern Brazil. Rev Soc Bras Med Trop. 2012; 45(1): 95-9[PubMed]
  • 20. Miyata M, Pavan FR, Sato DN, Marino LB, Hirata MH, Cardoso RF, et al. Drug resistance in Mycobacterium tuberculosis clinical isolates from Brazil: phenotypic and genotypic methods. Biomed Pharmacother. 2011; 65(6): 456-9[DOI][PubMed]
  • 21. Kocagoz T, Saribas Z, Alp A. Rapid determination of rifampin resistance in clinical isolates of Mycobacterium tuberculosis by real-time PCR. J Clin Microbiol. 2005; 43(12): 6015-9[DOI][PubMed]
  • 22. Soudani A, Hadjfredj S, Zribi M, Masmoudi A, Messaoud T, Tiouri H, et al. Characterization of Tunisian Mycobacterium tuberculosis rifampin-resistant clinical isolates. J Clin Microbiol. 2007; 45(9): 3095-7[DOI][PubMed]
  • 23. Zeka AN, Tasbakan S, Cavusoglu C. Evaluation of the GeneXpert MTB/RIF assay for rapid diagnosis of tuberculosis and detection of rifampin resistance in pulmonary and extrapulmonary specimens. J Clin Microbiol. 2011; 49(12): 4138-41[DOI][PubMed]
  • 24. Sheikholslami MF, Farnia P, Tabarsi P, Aghali Merza M, Valiollah Pour Amiri M, Mohammadi F. Comparison of polymerase chain reaction single-strand conformation polymorphism with DNA sequencing to detect drug resistance of Mycobacterium tuberculosis isolates. Iran J Clin Infect Dis. 2011; 6(2): 66-70
  • 25. Boehme CC, Nabeta P, Hillemann D, Nicol MP, Shenai S, Krapp F, et al. Rapid molecular detection of tuberculosis and rifampin resistance. N Engl J Med. 2010; 363(11): 1005-15[DOI][PubMed]
  • 26. Sahebi L, Khalil Ansarin K, Monfaredan A, Farajnia S, Nili S, Khalili M. Rapid Detection of Rifampicin- and Isoniazid-Resistant Mycobacterium tuberculosis Using Real-Time PCR. Jundishapur J Microbiol. : 29147
  • 27. Anti-tuberculosis drug resistance in the world: third global report. 2004;
  • 28. van Soolingen D, Hermans PW, de Haas PE, Soll DR, van Embden JD. Occurrence and stability of insertion sequences in Mycobacterium tuberculosis complex strains: evaluation of an insertion sequence-dependent DNA polymorphism as a tool in the epidemiology of tuberculosis. J Clin Microbiol. 1991; 29(11): 2578-86[PubMed]
  • 29. Temesgen Z, Satoh K, Uhl JR, Kline BC, Cockerill F3. Use of polymerase chain reaction single-strand conformation polymorphism (PCR-SSCP) analysis to detect a point mutation in the catalase-peroxidase gene (katG) of Mycobacterium tuberculosis. Mol Cell Probes. 1997; 11(1): 59-63[DOI][PubMed]
  • 30. Khoshneviszadeh M, Edraki N, Javidnia K, Alborzi A, Pourabbas B, Mardaneh J, et al. Synthesis and biological evaluation of some new 1,4-dihydropyridines containing different ester substitute and diethyl carbamoyl group as anti-tubercular agents. Bioorg Med Chem. 2009; 17(4): 1579-86[DOI][PubMed]
  • 31. Shah NS, Wright A, Bai GH, Barrera L, Boulahbal F, Martin-Casabona N, et al. Worldwide emergence of extensively drug-resistant tuberculosis. Emerg Infect Dis. 2007; 13(3): 380-7[DOI][PubMed]
  • 32. Kam KM, Yip CW. Surveillance of Mycobacterium tuberculosis susceptibility to second-line drugs in Hong Kong, 1995-2002, after the implementation of DOTS-plus. Int J Tuberc Lung Dis. 2004; 8(6): 760-6[PubMed]
  • 33. Sun Z, Chao Y, Zhang X, Zhang J, Li Y, Qiu Y, et al. Characterization of extensively drug-resistant Mycobacterium tuberculosis clinical isolates in China. J Clin Microbiol. 2008; 46(12): 4075-7[DOI][PubMed]
  • 34. WHO Global Task Force outlines measures to combat XDR TB worldwide. 2006;
  • 35. Bahrmand AR, Titov LP, Tasbiti AH, Yari S, Graviss EA. High-level rifampin resistance correlates with multiple mutations in the rpoB gene of pulmonary tuberculosis isolates from the Afghanistan border of Iran. J Clin Microbiol. 2009; 47(9): 2744-50[DOI][PubMed]
  • 36. Cheng X, Zhang J, Yang L, Xu X, Liu J, Yu W, et al. A new Multi-PCR-SSCP assay for simultaneous detection of isoniazid and rifampin resistance in Mycobacterium tuberculosis. J Microbiol Methods. 2007; 70(2): 301-5[DOI][PubMed]
  • 37. Isfahani BN, Tavakoli A, Salehi M, Tazhibi M. Detection of rifampin resistance patterns in Mycobacterium tuberculosis strains isolated in Iran by polymerase chain reaction-single-strand conformation polymorphism and direct sequencing methods. Mem Inst Oswaldo Cruz. 2006; 101(6): 597-602[PubMed]
  • 38. Imani F, Babak F, Fazlollah MS, Nematollah JJ. Rapid detection of MDR-Mycobacterium tuberculosis using modified PCR-SSCP from clinical Specimens. Asian Pac J Trop Biomed. 2014; 4: 165-70[DOI][PubMed]
  • 39. Steingart KR, Schiller I, Horne DJ, Pai M, Boehme CC, Dendukuri N. Xpert(R) MTB/RIF assay for pulmonary tuberculosis and rifampicin resistance in adults. Cochrane Database Syst Rev. 2014; (1): 9593[DOI][PubMed]
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